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    LOC101929373 uncharacterized LOC101929373 [ Homo sapiens (human) ]

    Gene ID: 101929373, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC101929373
    Gene description
    uncharacterized LOC101929373
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC101929373 in Genome Data Viewer
    Location:
    10q11.21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (42242512..42276842)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (43120041..43154366)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene formin-2-like Neighboring gene uncharacterized LOC105378267 Neighboring gene poly(A) binding protein cytoplasmic 1 pseudogene 8 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42794470-42795297 Neighboring gene NANOG hESC enhancer GRCh37_chr10:42796185-42796686 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42796729-42797555 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42798247-42798939 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42816107-42816891 Neighboring gene zinc finger protein 91 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3277 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3278 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3279

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      42242512..42276842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001747436.2 RNA Sequence

    2. XR_001747434.2 RNA Sequence

    3. XR_001747433.2 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187579.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      125069..159399
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001756330.2 RNA Sequence

    2. XR_001756328.2 RNA Sequence

    3. XR_001756327.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      43120041..43154366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007081403.1 RNA Sequence

    2. XR_007081402.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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