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    LOC102724851 uncharacterized LOC102724851 [ Homo sapiens (human) ]

    Gene ID: 102724851, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC102724851
    Gene description
    uncharacterized LOC102724851
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in testis (RPKM 1.6), ovary (RPKM 1.0) and 24 other tissues See more
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    Genomic context

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    See LOC102724851 in Genome Data Viewer
    Location:
    6p22.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (26671120..26687841)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (26539189..26556226)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 14 pseudogene Neighboring gene zinc finger protein 322 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:26659404-26659904 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:26659905-26660405 Neighboring gene tRNA-Ala (anticodon AGC) 14-1 Neighboring gene tRNA-Ala (anticodon AGC) 12-1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:26686676-26687875 duplicate 1 Neighboring gene tRNA-Ala (anticodon AGC) 10-1 Neighboring gene uncharacterized LOC105374991 Neighboring gene tRNA-Met (anticodon CAT) 5-1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:26704795-26705994 Neighboring gene transfer RNA alanine (anticodon AGC)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      26671120..26687841
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007059524.1 RNA Sequence

    2. XR_007059523.1 RNA Sequence

    3. XR_007059526.1 RNA Sequence

    4. XR_007059525.1 RNA Sequence

    5. XR_007059527.1 RNA Sequence

    6. XR_001744059.3 RNA Sequence

    7. XR_926628.4 RNA Sequence

    8. XR_001744062.2 RNA Sequence

    9. XR_001744063.3 RNA Sequence

    10. XR_007059529.1 RNA Sequence

    11. XR_007059528.1 RNA Sequence

    12. XR_007059530.1 RNA Sequence

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791780.1 Reference GRCh38.p14 PATCHES

      Range
      217115..233999
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007069496.1 RNA Sequence

    2. XR_007069500.1 RNA Sequence

    3. XR_007069505.1 RNA Sequence

    4. XR_007069504.1 RNA Sequence

    5. XR_007069503.1 RNA Sequence

    6. XR_007069502.1 RNA Sequence

    7. XR_007069501.1 RNA Sequence

    8. XR_007069506.1 RNA Sequence

    9. XR_007069497.1 RNA Sequence

    10. XR_007069498.1 RNA Sequence

    11. XR_007069499.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      26539189..26556226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007076661.1 RNA Sequence

    2. XR_007076659.1 RNA Sequence

    3. XR_007076652.1 RNA Sequence

    4. XR_007076656.1 RNA Sequence

    5. XR_007076660.1 RNA Sequence

    6. XR_007076662.1 RNA Sequence

    7. XR_007076658.1 RNA Sequence

    8. XR_007076657.1 RNA Sequence

    9. XR_007076663.1 RNA Sequence

    10. XR_007076653.1 RNA Sequence

    11. XR_007076655.1 RNA Sequence

    12. XR_007076654.1 RNA Sequence

    Nucleotide Protein
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