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    LINC01526 long intergenic non-protein coding RNA 1526 [ Homo sapiens (human) ]

    Gene ID: 101928770, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC01526provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1526provided by HGNC
    Primary source
    HGNC:HGNC:51265
    See related
    Ensembl:ENSG00000224995 AllianceGenome:HGNC:51265
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    Lnc-FAM46A-1
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC01526 in Genome Data Viewer
    Location:
    6q14.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (81813286..81814192, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (83022694..83023597, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (82523003..82523909, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:82462059-82462559 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24774 Neighboring gene uncharacterized LOC105377873 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24775 Neighboring gene terminal nucleotidyltransferase 5A Neighboring gene long intergenic non-protein coding RNA 2542 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:82647366-82648565 Neighboring gene MPRA-validated peak5921 silencer Neighboring gene Sharpr-MPRA regulatory region 11142 Neighboring gene uncharacterized LOC107986617 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24776 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:82853903-82855102 Neighboring gene inhibitor of Bruton tyrosine kinase Neighboring gene RNA, U6 small nuclear 130, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_126363.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC038196
      Related
      ENST00000441949.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      81813286..81814192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      83022694..83023597 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)