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    GRIN2A glutamate ionotropic receptor NMDA type subunit 2A [ Pongo pygmaeus (Bornean orangutan) ]

    Gene ID: 129015235, updated on 26-Mar-2024

    Summary

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    Gene symbol
    GRIN2A
    Gene description
    glutamate ionotropic receptor NMDA type subunit 2A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo pygmaeus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See GRIN2A in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonPyg2-v2.0_pri (GCF_028885625.2) 18 NC_072391.2 (11502289..11931318, complement)
    RS_2023_04 previous assembly NHGRI_mPonPyg2-v1.1-hic.freeze_pri (GCF_028885625.1) 16 NC_072389.1 (10363098..10798119, complement)

    Chromosome 18 - NC_072391.2Genomic Context describing neighboring genes Neighboring gene HUWE1 associated protein modifying stress responses Neighboring gene uncharacterized LOC129015238 Neighboring gene inosine-5'-monophosphate dehydrogenase 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene activating transcription factor 7 interacting protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NMDA glutamate receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in excitatory postsynaptic potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in long-term synaptic potentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NMDA selective glutamate receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamate receptor ionotropic, NMDA 2A
    Names
    glutamate receptor ionotropic N-methyl D-aspartate 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885625.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonPyg2-v2.0_pri Primary Assembly

    Genomic

    1. NC_072391.2 Reference NHGRI_mPonPyg2-v2.0_pri Primary Assembly

      Range
      11502289..11931318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054452862.2 → XP_054308837.1  glutamate receptor ionotropic, NMDA 2A isoform X2

    2. XM_054452861.2 → XP_054308836.1  glutamate receptor ionotropic, NMDA 2A isoform X1

    3. XM_054452863.2 → XP_054308838.1  glutamate receptor ionotropic, NMDA 2A isoform X3

    Nucleotide Protein
    Heading Accession and Version

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