faslgd Fas ligand family member d [Rhincodon typus (whale shark)] - Gene

Summary

Gene symbol: faslgd
Gene description: Fas ligand family member d
See related: EnsemblRapid:ENSRTYG00015018703
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rhincodon typus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
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Genomic context

Location:: chromosome: 10

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	sRhiTyp1.1 (GCF_021869965.1)	10	NC_063341.1 (12770082..12773830, complement)
100	previous assembly	ASM164234v2 (GCF_001642345.1)	Unplaced Scaffold	NW_018064240.1 (348730..352348)

Chromosome 10 - NC_063341.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables tumor necrosis factor receptor binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in apoptotic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in extrinsic apoptotic signaling pathway via death domain receptors	IEA Inferred from Electronic Annotation more info	PubMed
involved_in immune response	IEA Inferred from Electronic Annotation more info	PubMed
involved_in positive regulation of canonical NF-kappaB signal transduction	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: Fas ligand family member d; tumor necrosis factor ligand superfamily member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001422488.1 → NP_001409417.1 Fas ligand family member d

Status: VALIDATED

Source sequence(s)

JAHMAH010000010

RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

NC_063341.1 Reference sRhiTyp1.1

Range

12770082..12773830 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_020530320.2 → XP_020385909.1 tumor necrosis factor ligand superfamily member 6-like

Related

ENSRTYP00015029319.1, ENSRTYT00015032557.1

Conserved Domains (1) summary

cd00184
Location:103 → 239

TNF; Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal ...