tnfsf15 tumor necrosis factor ligand superfamily member 15 [Rhincodon typus (whale shark)] - Gene

Summary

Gene symbol: tnfsf15
Gene description: tumor necrosis factor ligand superfamily member 15
See related: EnsemblRapid:ENSRTYG00015013767
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rhincodon typus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 28

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	sRhiTyp1.1 (GCF_021869965.1)	28	NC_063359.1 (17937234..17941377, complement)
100	previous assembly	ASM164234v2 (GCF_001642345.1)	Unplaced Scaffold	NW_018067497.1 (1634..4938, complement)

Chromosome 28 - NC_063359.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables tumor necrosis factor receptor binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in immune response	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: tumor necrosis factor ligand superfamily member 15; tumor necrosis factor ligand superfamily member 15-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001422662.1 → NP_001409591.1 tumor necrosis factor ligand superfamily member 15

Status: VALIDATED

Source sequence(s)

JAHMAH010000028

RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

NC_063359.1 Reference sRhiTyp1.1

Range

17937234..17941377 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_020531692.2 → XP_020387281.1 tumor necrosis factor ligand superfamily member 15-like

Related

ENSRTYP00015021422.1, ENSRTYT00015023762.1

Conserved Domains (1) summary

pfam00229
Location:98 → 222

TNF; TNF(tumor Necrosis Factor) family