U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Tps1 Trehalose-6-phosphate synthase 1 [ Danaus plexippus (monarch butterfly) ]

    Gene ID: 116768844, updated on 23-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Tps1
    Gene description
    Trehalose-6-phosphate synthase 1
    See related
    EnsemblRapid:ENSDPXG00005015171
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danaus plexippus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Danainae; Danaini; Danaina; Danaus; Danaus
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Tps1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_11 current MEX_DaPlex (GCF_018135715.1) 4 NC_083538.1 (1886245..1897188)
    100 previous assembly Dplex_v4 (GCF_009731565.1) 11 NC_045817.1 (7344731..7352014, complement)

    Chromosome 4 - NC_083538.1Genomic Context describing neighboring genes Neighboring gene no mechanoreceptor potential C Neighboring gene medium-chain acyl-CoA ligase ACSF2, mitochondrial Neighboring gene protein YIPF6 Neighboring gene anaphase-promoting complex subunit 11 Neighboring gene protein dpy-30 homolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in trehalose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in trehalose metabolism in response to stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    alpha,alpha-trehalose-phosphate synthase [UDP-forming] A; uncharacterized protein LOC116768844
    Names
    alpha,alpha-trehalose-phosphate synthase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_018135715.1-RS_2023_11

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MEX_DaPlex

    Genomic

    1. NC_083538.1 Reference MEX_DaPlex

      Range
      1886245..1897188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061527406.1 → XP_061383390.1  uncharacterized protein LOC116768844 isoform X1

    2. XM_032659691.2 → XP_032515582.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] A isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.