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    Zfp33b zinc finger protein 33B [ Mus musculus (house mouse) ]

    Gene ID: 69623, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Zfp33bprovided by MGI
    Official Full Name
    zinc finger protein 33Bprovided by MGI
    Primary source
    MGI:MGI:1916873
    See related
    Ensembl:ENSMUSG00000120166 AllianceGenome:MGI:1916873
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310012P17Rik
    Summary
    Is expressed in early conceptus; inner cell mass; oocyte; and trophectoderm. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in testis adult (RPKM 1.4), CNS E18 (RPKM 1.3) and 24 other tissues See more
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    Genomic context

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    See Zfp33b in Genome Data Viewer
    Location:
    5 E5; 5 50.68 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (104718441..104734141)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (104570575..104584620)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_13829 Neighboring gene STARR-seq mESC enhancer starr_13830 Neighboring gene polycystin 2, transient receptor potential cation channel Neighboring gene THO complex subunit 2-like Neighboring gene STARR-positive B cell enhancer ABC_E4770 Neighboring gene STARR-seq mESC enhancer starr_13832 Neighboring gene predicted gene, 54331 Neighboring gene NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 pseudogene Neighboring gene predicted gene, 31255 Neighboring gene STARR-seq mESC enhancer starr_13833 Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount in situ hybridization. Yoshikawa T, et al. Gene Expr Patterns, 2006 Jan. PMID 16325481, Free PMC Article
    2. Transcriptome analysis of mouse stem cells and early embryos. Sharov AA, et al. PLoS Biol, 2003 Dec. PMID 14691545, Free PMC Article
    3. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
    4. Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. Guo G, et al. Dev Cell, 2010 Apr 20. PMID 20412781
    5. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, et al. Science, 2004 Dec 24. PMID 15618518

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 33B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424317.1 → NP_001411246.1  zinc finger protein 33B

      Status: VALIDATED

      Source sequence(s)
      AC123687
      UniProtKB/TrEMBL
      A0A9L6KDG1
      Related
      ENSMUSP00000159605.1, ENSMUST00000242469.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      104718441..104734141
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_062871538.1 → XP_062727522.1  zinc finger protein 33B isoform X1

      UniProtKB/TrEMBL
      A0A9L6KDU1
      Related
      ENSMUSP00000159607.1, ENSMUST00000247219.1

    2. XM_062871540.1 → XP_062727524.1  zinc finger protein 33B isoform X2

    3. XM_062871539.1 → XP_062727523.1  zinc finger protein 33B isoform X2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001346671.1: Suppressed sequence

      Description
      NM_001346671.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.

    2. NM_001346672.1: Suppressed sequence

      Description
      NM_001346672.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.

    3. NM_027142.1: Suppressed sequence

      Description
      NM_027142.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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