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    LOC103690480 uncharacterized LOC103690480 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 103690480, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC103690480provided by RGD
    Full Name
    uncharacterized LOC103690480provided by RGD
    Primary source
    RGD:9140766
    See related
    EnsemblRapid:ENSRNOG00000072828 AllianceGenome:RGD:9140766
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Brain (RPKM 34.4), Spleen (RPKM 16.7) and 5 other tissues See more
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    Genomic context

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    See LOC103690480 in Genome Data Viewer
    Location:
    8q32
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (131074533..131187835)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (122197035..122294433)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (131627942..131712086)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102552982 Neighboring gene abhydrolase domain containing 5, lysophosphatidic acid acyltransferase Neighboring gene uncharacterized LOC102550701 Neighboring gene microRNA 138-1 Neighboring gene testis and ovary specific TOPAZ 1 Neighboring gene T cell activation inhibitor, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      131074533..131187835
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010054544.1 RNA Sequence

    2. XR_010054542.1 RNA Sequence

    3. XR_010054545.1 RNA Sequence

    4. XR_001839598.3 RNA Sequence

      Related
      ENSRNOT00000136605.1

    5. XR_010054548.1 RNA Sequence

    6. XR_010054549.1 RNA Sequence

    7. XR_010054546.1 RNA Sequence

      Related
      ENSRNOT00000136368.1

    8. XR_010054541.1 RNA Sequence

      Related
      ENSRNOT00000121122.1

    9. XR_010054543.1 RNA Sequence

    10. XR_010054550.1 RNA Sequence

    11. XR_010054547.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials