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    USP9Y ubiquitin specific peptidase 9 Y-linked [ Gorilla gorilla gorilla (western lowland gorilla) ]

    Gene ID: 129530408, updated on 10-Oct-2024

    Summary

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    Gene symbol
    USP9Y
    Gene description
    ubiquitin specific peptidase 9 Y-linked
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gorilla gorilla gorilla (sub-species: gorilla)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
    Orthologs
    human all
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    Genomic context

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    See USP9Y in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    48
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) Y NC_073248.2 (31260866..31465307, complement)
    RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) Y NC_073248.1 (31819231..32023668, complement)

    Chromosome Y - NC_073248.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134757948 Neighboring gene DEAD-box helicase 3 Y-linked Neighboring gene testis-specific chromodomain protein Y 1-like Neighboring gene protein Shroom2-like Neighboring gene protein FAM8A1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ubiquitin carboxyl-terminal hydrolase FAF-Y

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073248.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

      Range
      31260866..31465307 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055377209.2 → XP_055233184.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X5

    2. XM_055377205.2 → XP_055233180.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1

      UniProtKB/TrEMBL
      C3UJQ9

    3. XM_063703409.1 → XP_063559479.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X5

    4. XM_063703406.1 → XP_063559476.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X2

    5. XM_063703411.1 → XP_063559481.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X7

    6. XM_063703410.1 → XP_063559480.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X6

    7. XM_063703408.1 → XP_063559478.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X4

    8. XM_055377204.2 → XP_055233179.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1

      UniProtKB/TrEMBL
      C3UJQ9

    9. XM_055377203.2 → XP_055233178.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1

      UniProtKB/TrEMBL
      C3UJQ9

    10. XM_063703407.1 → XP_063559477.1  probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X3

    Nucleotide Protein
    Heading Accession and Version

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