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    Vwa5al1 von Willebrand factor A domain containing 5A like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 300608, updated on 10-Jul-2024

    Summary

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    Official Symbol
    Vwa5al1provided by RGD
    Official Full Name
    von Willebrand factor A domain containing 5A like 1provided by RGD
    Primary source
    RGD:1311744
    See related
    EnsemblRapid:ENSRNOG00000005960 AllianceGenome:RGD:1311744
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311744
    Expression
    Biased expression in Muscle (RPKM 79.2), Heart (RPKM 52.7) and 9 other tissues See more
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    Genomic context

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    See Vwa5al1 in Genome Data Viewer
    Location:
    8q22
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (48767698..48788740, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (39869937..39890669, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (43315104..43336357, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 10 subfamily D member 3 Neighboring gene olfactory receptor family 10 subfamily D member 1 Neighboring gene olfactory receptor family 10 subfamily N member 1 Neighboring gene olfactory receptor family 10 subfamily D member 4B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    General protein information

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    Preferred Names
    von Willebrand factor A domain containing 5A like 1; von Willebrand factor A domain-containing protein 5A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001430513.1 → NP_001417442.1  von Willebrand factor A domain containing 5A like 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6J3M6

    2. NM_001430514.1 → NP_001417443.1  von Willebrand factor A domain containing 5A like 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6J3M6

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      48767698..48788740 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063266330.1 → XP_063122400.1  von Willebrand factor A domain-containing protein 5A

      Related
      ENSRNOP00000077219.1, ENSRNOT00000110068.2

    2. XM_056984520.2 → XP_056840500.1  von Willebrand factor A domain-containing protein 5A

    Nucleotide Protein Strain
    Heading Accession and Version

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