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    LOC102724938 uncharacterized LOC102724938 [ Homo sapiens (human) ]

    Gene ID: 102724938, updated on 17-Jun-2024

    Summary

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    Gene symbol
    LOC102724938
    Gene description
    uncharacterized LOC102724938
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 2.1) See more
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    Genomic context

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    See LOC102724938 in Genome Data Viewer
    Location:
    15q22.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (62266961..62269076)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (60070985..60073100)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984784 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:62534714-62535214 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:62535215-62535715 Neighboring gene GOLGA2 pseudogene 11 Neighboring gene Sharpr-MPRA regulatory region 15238 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:62554405-62555604 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr15:62587380-62587893 Neighboring gene Sharpr-MPRA regulatory region 8292 Neighboring gene microRNA 8067 Neighboring gene microRNA 6085

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. A germline-specific class of small RNAs binds mammalian Piwi proteins. Girard A, et al. Nature, 2006 Jul 13. PMID 16751776
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      62266961..62269076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_932342.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      60070985..60073100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007085609.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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