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    PCK1 phosphoenolpyruvate carboxykinase 1 [ Anomalospiza imberbis ]

    Gene ID: 137484271, updated on 11-Sep-2024

    Summary

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    Gene symbol
    PCK1
    Gene description
    phosphoenolpyruvate carboxykinase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anomalospiza imberbis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Anomalospiza
    Orthologs
    human mouse all
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    Genomic context

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    See PCK1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_07 current ASM3175350v1 (GCF_031753505.1) 17 NC_089697.1 (11820065..11879973, complement)

    Chromosome 17 - NC_089697.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137484274 Neighboring gene uncharacterized LOC137484455 Neighboring gene uncharacterized LOC137484268 Neighboring gene prostate transmembrane protein, androgen induced 1 Neighboring gene uncharacterized LOC137484273 Neighboring gene uncharacterized LOC137484269 Neighboring gene uncharacterized LOC137484270 Neighboring gene uncharacterized LOC137484275 Neighboring gene CCCTC-binding factor like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089697.1 Chromosome 17 Reference ASM3175350v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphoenolpyruvate carboxykinase (GTP) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to dexamethasone stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to glucose stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to insulin stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycerol biosynthetic process from pyruvate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hepatocyte differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in propionate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Names
    cytosolic phosphoenolpyruvate carboxykinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031753505.1-RS_2024_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3175350v1

    Genomic

    1. NC_089697.1 Reference ASM3175350v1

      Range
      11820065..11879973 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068207993.1 → XP_068064094.1  phosphoenolpyruvate carboxykinase, cytosolic [GTP] isoform X2

    2. XM_068207992.1 → XP_068064093.1  phosphoenolpyruvate carboxykinase, cytosolic [GTP] isoform X1

    Nucleotide Protein
    Heading Accession and Version

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