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    DISC1FP1 DISC1 fusion partner 1 [ Homo sapiens (human) ]

    Gene ID: 101929222, updated on 26-Oct-2024

    Summary

    Official Symbol
    DISC1FP1provided by HGNC
    Official Full Name
    DISC1 fusion partner 1provided by HGNC
    Primary source
    HGNC:HGNC:33625
    See related
    AllianceGenome:HGNC:33625
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    Boymaw
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See DISC1FP1 in Genome Data Viewer
    Location:
    11q14.3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (90251232..90915052)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (90171311..90836304)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (89984400..90648220)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902812 Neighboring gene NANOG hESC enhancer GRCh37_chr11:89961208-89961714 Neighboring gene Sharpr-MPRA regulatory region 337 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:89974290-89974542 Neighboring gene cysteine and histidine rich domain containing 1 Neighboring gene tubulin alpha pseudogene 2 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:90138436-90139016 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:90139017-90139595 Neighboring gene Sharpr-MPRA regulatory region 15479 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:90171133-90171860 Neighboring gene NANOG hESC enhancer GRCh37_chr11:90318470-90318971 Neighboring gene microRNA 4490 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5387 Neighboring gene NANOG hESC enhancer GRCh37_chr11:90470663-90471164 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:90508083-90508821 Neighboring gene microRNA 1261 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:90836591-90836792 Neighboring gene oxysterol binding protein like 9 pseudogene 2 Neighboring gene oxysterol binding protein like 9 pseudogene 3 Neighboring gene long intergenic non-protein coding RNA 2748

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl's gyrus.
    EBI GWAS Catalog
    Common genetic variation and the control of HIV-1 in humans.
    EBI GWAS Catalog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Other Names

    • DISC1 fusion partner 1 (non-protein coding)
    • DISC1/FP1 fusion

    Clone Names

    • FLJ27116

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_104190.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AP003058, CK000409

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      90251232..90915052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      90171311..90836304
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)