U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    SEC61B SEC61 translocon subunit beta [ Canis lupus familiaris (dog) ]

    Gene ID: 404018, updated on 17-Aug-2024

    Summary

    Official Symbol
    SEC61Bprovided by VGNC
    Official Full Name
    SEC61 translocon subunit betaprovided by VGNC
    Primary source
    VGNC:VGNC:49616
    See related
    Ensembl:ENSCAFG00845007765
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See SEC61B in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (57387547..57394054)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (54710432..54716934)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (56616366..56622875)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (55892012..55898512)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (55916992..55923491)

    Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha type-1-like Neighboring gene ALG2 alpha-1,3/1,6-mannosyltransferase Neighboring gene uncharacterized LOC111098106 Neighboring gene uncharacterized LOC102153673

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    protein transport protein Sec61 subunit beta
    Names
    SEC61 translocon beta subunit
    Sec61 beta subunit
    protein translocation complex beta subunit

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003326.1NP_001003326.1  protein transport protein Sec61 subunit beta

      See identical proteins and their annotated locations for NP_001003326.1

      Status: PROVISIONAL

      Source sequence(s)
      L25052
      UniProtKB/Swiss-Prot
      P60467
      UniProtKB/TrEMBL
      A0A8C0R3V6
      Related
      ENSCAFP00845010616.1, ENSCAFT00845013672.1
      Conserved Domains (1) summary
      pfam03911
      Location:5491
      Sec61_beta; Sec61beta family

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051815.1 Reference ROS_Cfam_1.0

      Range
      57387547..57394054
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049271.1 Alternate UMICH_Zoey_3.1

      Range
      55892012..55898512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

      Range
      55916992..55923491
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

      Range
      56616366..56622875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      54710432..54716934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)