U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC100192673 LOC100279415-like pseudogene [ Zea mays ]

    Gene ID: 100192673, updated on 8-Sep-2020

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100192673
    Gene description
    LOC100279415-like pseudogene
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100192673 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 6 NC_050101.1 (89247981..89250939, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 6 NC_024464.2 (82692730..82695688, complement)

    Chromosome 6 - NC_050101.1Genomic Context describing neighboring genes Neighboring gene zinc finger, C2H2 type family protein Neighboring gene uncharacterized LOC118472198 Neighboring gene ethylene-responsive transcription factor RAP2-9 Neighboring gene uncharacterized LOC100275171 Neighboring gene uncharacterized LOC118472199

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification of maize long non-coding RNAs responsive to drought stress. Zhang W, et al. PLoS One, 2014. PMID 24892290, Free PMC Article
    2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_157138.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      KJ731882

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050101.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      89247981..89250939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Research Materials