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    LOC100193471 uncharacterized LOC100193471 [ Zea mays ]

    Gene ID: 100193471, updated on 14-Dec-2023

    Summary

    Gene symbol
    LOC100193471
    Gene description
    uncharacterized LOC100193471
    Locus tag
    ZEAMMB73_Zm00001d000080
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G383240
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    Genomic context

    See LOC100193471 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 3 NC_050098.1 (424213..432335, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) Unplaced Scaffold NW_017972032.1 (423872..431937, complement)

    Chromosome 3 - NC_050098.1Genomic Context describing neighboring genes Neighboring gene calcium permeable stress-gated cation channel 1 Neighboring gene uncharacterized LOC109943273 Neighboring gene rRNA biogenesis protein RRP36 Neighboring gene uncharacterized LOC109943277 Neighboring gene uncharacterized LOC118476619

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    CBL-interacting protein kinase 8; uncharacterized protein LOC100193471
    Names
    CBL-interacting serine/threonine-protein kinase 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001317191.1NP_001304120.1  CBL-interacting protein kinase 8

      Status: VALIDATED

      Source sequence(s)
      AY104543, BT035739, EU973485
      UniProtKB/TrEMBL
      A0A804MX80
      Conserved Domains (3) summary
      cd12195
      Location:243348
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      smart00220
      Location:16248
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:15226
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050098.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      424213..432335 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020546177.3XP_020401766.1  uncharacterized protein LOC100193471 isoform X1

      UniProtKB/TrEMBL
      A0A1D6DQ40, A0A1D6NN50
      Conserved Domains (2) summary
      cd12195
      Location:314419
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:15268
      PKc_like; Protein Kinases, catalytic domain
    2. XM_020546178.3XP_020401767.1  uncharacterized protein LOC100193471 isoform X2

      UniProtKB/TrEMBL
      A0A1D6NN50
      Conserved Domains (2) summary
      cd12195
      Location:273378
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:15256
      PKc_like; Protein Kinases, catalytic domain
    3. XM_035965646.1XP_035821539.1  uncharacterized protein LOC100193471 isoform X4

      UniProtKB/TrEMBL
      A0A1D6NN50
      Conserved Domains (2) summary
      cd12195
      Location:228333
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:15211
      PKc_like; Protein Kinases, catalytic domain
    4. XM_020546179.3XP_020401768.1  uncharacterized protein LOC100193471 isoform X3

      UniProtKB/TrEMBL
      A0A1D6NN50, A0A804MX76
      Conserved Domains (2) summary
      cd12195
      Location:269374
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:15223
      PKc_like; Protein Kinases, catalytic domain

    RNA

    1. XR_002265961.3 RNA Sequence

    2. XR_004856883.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001138587.1: Suppressed sequence

      Description
      NM_001138587.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.