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    Amph amphiphysin [ Fukomys damarensis (Damara mole-rat) ]

    Gene ID: 104853053, updated on 12-Mar-2024

    Summary

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    Gene symbol
    Amph
    Gene description
    amphiphysin
    Locus tag
    H920_18011
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Fukomys damarensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
    Orthologs
    human mouse all
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    Genomic context

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    See Amph in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900929.1 (10428522..10587767, complement)
    101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011047298.1 (4897703..5056948)

    NW_022900929.1Genomic Context describing neighboring genes Neighboring gene T-cell receptor gamma chain C region C10.5-like Neighboring gene T-cell receptor gamma chain V region V108B-like Neighboring gene uncharacterized LOC104853043 Neighboring gene uncharacterized LOC104853040 Neighboring gene VPS41 subunit of HOPS complex

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amphiphysin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DMR_v1.0_HiC Primary Assembly

    Genomic

    1. NW_022900929.1 Reference DMR_v1.0_HiC Primary Assembly

      Range
      10428522..10587767 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010610871.1 → XP_010609173.1  amphiphysin

      UniProtKB/TrEMBL
      A0A091CT14
      Conserved Domains (2) summary
      cd07611
      Location:84 → 294
      BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
      cd12140
      Location:669 → 740
      SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I
    Nucleotide Protein
    Heading Accession and Version

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