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    tacr2 tachykinin receptor 2 [ Gasterosteus aculeatus (three-spined stickleback) ]

    Gene ID: 120834986, updated on 10-Oct-2024

    Summary

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    Gene symbol
    tacr2
    Gene description
    tachykinin receptor 2
    See related
    Ensembl:ENSGACG00000016103
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gasterosteus aculeatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
    Orthologs
    human zebrafish all
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    Genomic context

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    See tacr2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current GAculeatus_UGA_version5 (GCF_016920845.1) 2 NC_053213.1 (13841775..13847890, complement)

    Chromosome 2 - NC_053213.1Genomic Context describing neighboring genes Neighboring gene hexokinase HKDC1-like Neighboring gene hexokinase-3-like Neighboring gene hexokinase-1 Neighboring gene tetraspanin 15 Neighboring gene zinc finger protein 835-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053213.1 Chromosome 2 Reference GAculeatus_UGA_version5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Prevertebrate Local Gene Duplication Facilitated Expansion of the Neuropeptide GPCR Superfamily. Yun S, et al. Mol Biol Evol, 2015 Nov. PMID 26337547
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables substance K receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of flagellated sperm motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm midpiece IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    substance-K receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GAculeatus_UGA_version5 Primary Assembly

    Genomic

    1. NC_053213.1 Reference GAculeatus_UGA_version5 Primary Assembly

      Range
      13841775..13847890 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040203437.1 → XP_040059371.1  substance-K receptor

      UniProtKB/TrEMBL
      A0AAQ4PJD8, A0AAQ4PU25
      Related
      ENSGACP00000038777.1, ENSGACT00000047454.1
      Conserved Domains (1) summary
      cd16004
      Location:40 → 323
      7tmA_SKR_NK2R; substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_040203428.1 → XP_040059362.1  substance-K receptor

      UniProtKB/TrEMBL
      A0AAQ4PJD8, A0AAQ4PU25
      Related
      ENSGACP00000042232.1, ENSGACT00000086365.1
      Conserved Domains (1) summary
      cd16004
      Location:40 → 323
      7tmA_SKR_NK2R; substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein Strain
    Heading Accession and Version

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