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    LOC100283343 uncharacterized LOC100283343 [ Zea mays ]

    Gene ID: 100283343, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100283343
    Gene description
    uncharacterized LOC100283343
    Locus tag
    ZEAMMB73_Zm00001d027359
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    fus6; csu896; GRMZM2G062210
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (3642106..3652133, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (3651116..3661143, complement)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene membrane protein Neighboring gene ATPP2-A13 Neighboring gene uncharacterized LOC100274439

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the maize endosperm transcriptome and its comparison to the rice genome. Lai J, et al. Genome Res, 2004 Oct. PMID 15466291, Free PMC Article
    2. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of COP9 signalosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    COP9 signalosome complex subunit 1
    Names
    CL32446_1
    cl32446_1(4)
    csuh00896
    csuh896
    fusca homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001156244.2 → NP_001149716.1  COP9 signalosome complex subunit 1

      See identical proteins and their annotated locations for NP_001149716.1

      Status: PROVISIONAL

      Source sequence(s)
      EU964381
      UniProtKB/TrEMBL
      A0A1D6JLA4, B6THB6
      Conserved Domains (2) summary
      pfam01399
      Location:295 → 399
      PCI; PCI domain
      pfam10602
      Location:106 → 280
      RPN7; 26S proteasome subunit RPN7

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      3642106..3652133 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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