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    yebG DNA damage-inducible protein YebG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946364, updated on 19-Sep-2024

    Summary

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    Official Symbol
    yebG
    Official Full Name
    DNA damage-inducible protein YebG
    Primary source
    ECOCYC:EG11808
    Locus tag
    b1848
    See related
    ASAP:ABE-0006145
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1849
    Summary
    The yebG gene is a DNA damage-inducible gene of the SOS regulon . [More information is available at EcoCyc: EG11808].
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    Genomic context

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    Sequence:
    NC_000913.3 (1930457..1930747, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF533 domain-containing inner membrane protein YebE Neighboring gene secreted protein YebF Neighboring gene phosphoribosylglycinamide formyltransferase 2 Neighboring gene KHG/KDPG aldolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of yebG as a DNA damage-inducible Escherichia coli gene. Lomba MR, et al. FEMS Microbiol Lett, 1997 Nov 1. PMID 9368369
    2. A genomic approach to gene fusion technology. Van Dyk TK, et al. Proc Natl Acad Sci U S A, 2001 Feb 27. PMID 11226277, Free PMC Article
    3. Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles. Faith JJ, et al. PLoS Biol, 2007 Jan. PMID 17214507, Free PMC Article
    4. Evaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNA. Benítez-Bellón E, et al. Genome Biol, 2002. PMID 11897025, Free PMC Article
    5. Reconstructing repressor protein levels from expression of gene targets in Escherichia coli. Khanin R, et al. Proc Natl Acad Sci U S A, 2006 Dec 5. PMID 17121995, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA repair IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within SOS response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to X-ray IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA damage-inducible protein YebG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1930457..1930747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416362.1 DNA damage-inducible protein YebG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416362.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376S8G2
      Conserved Domains (1) summary
      PRK10061
      Location:1 → 96
      PRK10061; DNA damage-inducible protein YebG; Provisional
    Nucleotide Protein
    Heading Accession and Version

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