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    ZFP2 zinc finger transcription factor SlZFP2 [ Solanum lycopersicum (tomato) ]

    Gene ID: 108150742, updated on 9-Nov-2023

    Summary

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    Gene symbol
    ZFP2
    Gene description
    zinc finger transcription factor SlZFP2
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    Also known as
    SlZFP2
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    Genomic context

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    See ZFP2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 7 NC_015444.3 (1742030..1742658)
    102 previous assembly SL2.50 (GCF_000188115.3) 7 NC_015444.2 (1741966..1742594)

    Chromosome 7 - NC_015444.3Genomic Context describing neighboring genes Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 25 Neighboring gene CASP-like protein 2C1 Neighboring gene cytochrome P450 94A1-like Neighboring gene auxin efflux carrier component 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manipulation of flowering time and branching by overexpression of the tomato transcription factor SlZFP2. Weng L, et al. Plant Biotechnol J, 2016 Dec. PMID 27214796, Free PMC Article
    2. RNA sequencing analysis of gene expression regulated by the transcription factor SlZFP2 during early fruit development. Weng L, et al. Genom Data, 2016 Jun. PMID 27114906, Free PMC Article
    3. Cross-talk modulation between ABA and ethylene by transcription factor SlZFP2 during fruit development and ripening in tomato. Weng L, et al. Plant Signal Behav, 2015. PMID 26492077, Free PMC Article
    4. The zinc finger transcription factor SlZFP2 negatively regulates abscisic acid biosynthesis and fruit ripening in tomato. Weng L, et al. Plant Physiol, 2015 Mar. PMID 25637453, Free PMC Article
    5. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SlZFP2 likely modulates the cross-talk between ABA and ethylene in regulation of fruit development and ripening in tomato.[SlZFP2]
      Title: Cross-talk modulation between ABA and ethylene by transcription factor SlZFP2 during fruit development and ripening in tomato.
    2. SlZFP2 functions as a repressor to fine-tune abscissic acid biosynthesis during fruit development.
      Title: The zinc finger transcription factor SlZFP2 negatively regulates abscisic acid biosynthesis and fruit ripening in tomato.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of abscisic acid-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger transcription factor SlZFP2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328428.1 → NP_001315357.1  zinc finger transcription factor SlZFP2

      Status: VALIDATED

      Source sequence(s)
      AK326074, AW222575
      UniProtKB/TrEMBL
      A0A3Q7H6R1

    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015444.3 Reference SL3.0 Primary Assembly

      Range
      1742030..1742658
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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