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    wu:fj16a03 toxin-1 [ Oncorhynchus mykiss (rainbow trout) ]

    Gene ID: 100135970, updated on 8-Mar-2024

    Summary

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    Gene symbol
    wu:fj16a03
    Gene description
    toxin-1
    See related
    Ensembl:ENSOMYG00000026703
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Oncorhynchus mykiss
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    zebrafish all
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    Genomic context

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    See wu:fj16a03 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current USDA_OmykA_1.1 (GCF_013265735.2) 1 NC_048565.1 (66014185..66019038)
    100 previous assembly Omyk_1.0 (GCF_002163495.1) 1 NC_035077.1 (62138854..62144726)

    Chromosome 1 - NC_048565.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TRIM21-like Neighboring gene tripartite motif-containing protein 35 Neighboring gene echinoderm microtubule-associated protein-like 4 Neighboring gene eukaryotic translation initiation factor 5A-1-like Neighboring gene protein kinase domain containing, cytoplasmic a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A toxin-like gene in rainbow trout: cloning, expression, and gene organization. Georgaka E, et al. Toxicon, 2007 Jun 1. PMID 17400269

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100135970

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001124310.1 → NP_001117782.1  uncharacterized protein LOC100135970 precursor

      See identical proteins and their annotated locations for NP_001117782.1

      Status: PREDICTED

      Source sequence(s)
      AF363273
      UniProtKB/TrEMBL
      A0A8C7RVX9, Q8JJ66
      Related
      ENSOMYP00000057852.1, ENSOMYT00000062969.2

    RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_OmykA_1.1 Primary Assembly

    Genomic

    1. NC_048565.1 Reference USDA_OmykA_1.1 Primary Assembly

      Range
      66014185..66019038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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