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    NOTCH1 notch receptor 1 [ Coturnix japonica (Japanese quail) ]

    Gene ID: 107321700, updated on 14-Mar-2024

    Summary

    Gene symbol
    NOTCH1
    Gene description
    notch receptor 1
    See related
    Ensembl:ENSCJPG00005008142
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Coturnix japonica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
    Orthologs
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    Genomic context

    See NOTCH1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    101 current Coturnix japonica 2.1 (GCF_001577835.2) 17 NC_029532.1 (6304784..6339593)

    Chromosome 17 - NC_029532.1Genomic Context describing neighboring genes Neighboring gene EGF like domain multiple 7 Neighboring gene uncharacterized LOC107321690 Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene inositol polyphosphate-5-phosphatase E

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_029532.1 Chromosome 17 Reference Coturnix japonica 2.1 Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Notch binding PubMed 
    enables calcium ion binding PubMed 
    enables signaling receptor activity PubMed 
    Component Evidence Code Pubs
    located_in membrane PubMed 

    General protein information

    Preferred Names
    neurogenic locus notch homolog protein 1
    Names
    notch 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Coturnix japonica 2.1 Primary Assembly

    Genomic

    1. NC_029532.1 Reference Coturnix japonica 2.1 Primary Assembly

      Range
      6304784..6339593
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015878847.1XP_015734333.1  neurogenic locus notch homolog protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C2T728
      Related
      ENSCJPP00005009359.1, ENSCJPT00005014000.1
      Conserved Domains (9) summary
      smart00004
      Location:14421479
      NL; Domain found in Notch and Lin-12
      cd00054
      Location:945981
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00204
      Location:19222034
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam00066
      Location:14871522
      Notch; LNR domain
      pfam06816
      Location:15671618
      NOD; NOTCH protein
      pfam07684
      Location:16711727
      NODP; NOTCH protein
      pfam11936
      Location:24742535
      DUF3454; Domain of unknown function (DUF3454)
      pfam12796
      Location:19322025
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:18801925
      ANK; ANK repeat [structural motif]
    2. XM_015878848.1XP_015734334.1  neurogenic locus notch homolog protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C2T728
      Conserved Domains (9) summary
      smart00004
      Location:13961433
      NL; Domain found in Notch and Lin-12
      cd00054
      Location:945981
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00204
      Location:18761988
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam00066
      Location:14411476
      Notch; LNR domain
      pfam06816
      Location:15211572
      NOD; NOTCH protein
      pfam07684
      Location:16251681
      NODP; NOTCH protein
      pfam11936
      Location:24282489
      DUF3454; Domain of unknown function (DUF3454)
      pfam12796
      Location:18861979
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:18341879
      ANK; ANK repeat [structural motif]
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