U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    BTRC beta-transducin repeat containing E3 ubiquitin protein ligase [ Papio anubis (olive baboon) ]

    Gene ID: 101010993, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    BTRC
    Gene description
    beta-transducin repeat containing E3 ubiquitin protein ligase
    See related
    Ensembl:ENSPANG00000021065
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Papio anubis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BTRC in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    104 current Panubis1.0 (GCF_008728515.1) 11 NC_044986.1 (31986355..32192678, complement)
    103 previous assembly Panu_3.0 (GCF_000264685.3) 9 NC_018160.2 (93553473..93761303)

    Chromosome 11 - NC_044986.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S27-like Neighboring gene deleted in primary ciliary dyskinesia homolog (mouse) Neighboring gene DNA polymerase lambda Neighboring gene small nucleolar RNA U13 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC103887692

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    F-box/WD repeat-containing protein 1A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Panubis1.0 Primary Assembly

    Genomic

    1. NC_044986.1 Reference Panubis1.0 Primary Assembly

      Range
      31986355..32192678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009215205.4 → XP_009213469.1  F-box/WD repeat-containing protein 1A isoform X2

      See identical proteins and their annotated locations for XP_009213469.1

      Conserved Domains (4) summary
      cd00200
      Location:432 → 710
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:435 → 470
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:268 → 306
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:310 → 357
      F-box-like

    2. XM_003904146.4 → XP_003904195.1  F-box/WD repeat-containing protein 1A isoform X9

      See identical proteins and their annotated locations for XP_003904195.1

      UniProtKB/TrEMBL
      A0A2I3MXI5
      Related
      ENSPANP00000040370.1, ENSPANT00000048677.2
      Conserved Domains (4) summary
      cd00200
      Location:267 → 545
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:270 → 305
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:103 → 141
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:145 → 192
      F-box-like

    3. XM_003904145.4 → XP_003904194.1  F-box/WD repeat-containing protein 1A isoform X7

      See identical proteins and their annotated locations for XP_003904194.1

      UniProtKB/TrEMBL
      A0A2I3LJ03
      Related
      ENSPANP00000023417.1, ENSPANT00000040267.2
      Conserved Domains (4) summary
      cd00200
      Location:303 → 581
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:306 → 341
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:139 → 177
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:181 → 228
      F-box-like

    4. XM_017944244.3 → XP_017799733.1  F-box/WD repeat-containing protein 1A isoform X1

    5. XM_017944245.3 → XP_017799734.1  F-box/WD repeat-containing protein 1A isoform X3

    6. XM_017944248.3 → XP_017799737.1  F-box/WD repeat-containing protein 1A isoform X6

    7. XM_017944246.3 → XP_017799735.1  F-box/WD repeat-containing protein 1A isoform X5

    8. XM_017944250.3 → XP_017799739.1  F-box/WD repeat-containing protein 1A isoform X8

    9. XM_017944247.3 → XP_017799736.1  F-box/WD repeat-containing protein 1A isoform X6

    10. XM_009215207.4 → XP_009213471.1  F-box/WD repeat-containing protein 1A isoform X4

      Conserved Domains (5) summary
      COG2319
      Location:419 → 624
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:432 → 641
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam12125
      Location:268 → 306
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:310 → 357
      F-box-like; F-box-like
      sd00039
      Location:435 → 470
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.