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    Protein phosphatase 2A regulatory B subunit family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822199, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Protein phosphatase 2A regulatory B subunit family protein
    Primary source
    TAIR:AT3G26020
    Locus tag
    AT3G26020
    See related
    Araport:AT3G26020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (9513645..9516930)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene Ribonuclease inhibitor Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta Neighboring gene HXXXD-type acyl-transferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis cyclophilin CYP18-1 facilitates PRP18 dephosphorylation and the splicing of introns retained under heat stress. Jo SH, et al. Plant Cell, 2022 May 24. PMID 35262729, Free PMC Article
    2. Diversity in subcellular targeting of the PP2A B'eta subfamily members. Matre P, et al. Planta, 2009 Oct. PMID 19672620
    3. The Brassinosteroid-Activated BRI1 Receptor Kinase Is Switched off by Dephosphorylation Mediated by Cytoplasm-Localized PP2A B' Subunits. Wang R, et al. Mol Plant, 2016 Jan 4. PMID 26517938
    4. PP2A activates brassinosteroid-responsive gene expression and plant growth by dephosphorylating BZR1. Tang W, et al. Nat Cell Biol, 2011 Feb. PMID 21258370, Free PMC Article
    5. Identification of BZR1-interacting proteins as potential components of the brassinosteroid signaling pathway in Arabidopsis through tandem affinity purification. Wang C, et al. Mol Cell Proteomics, 2013 Dec. PMID 24019147, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001035693.2
    NM_001161175.1
    NM_001161176.1
    NM_001338773.1
    NM_001338775.1
    NM_001338776.1
    NM_113506.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to heat IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within mRNA splicing, via spliceosome IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    part_of protein phosphatase type 2A complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Protein phosphatase 2A regulatory B subunit family protein
    NP_001030770.1
    • Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001154648.1
    • Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink).
    NP_001319644.1
    • Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1172 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 579; Fungi - 163; Plants - 301; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).
    NP_189231.1
    • Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1378 Blast hits to 1295 proteins in 202 species: Archae - 0; Bacteria - 8; Metazoa - 590; Fungi - 185; Plants - 302; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9513645..9516930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338774.1 → NP_001326835.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DH07, Q9LU89
      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84

    2. NM_113506.2 → NP_189231.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189231.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DH07, Q9LU89
      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84
      Conserved Domains (2) summary
      PLN00122
      Location:410 → 509
      PLN00122; serine/threonine protein phosphatase 2A; Provisional
      pfam01603
      Location:101 → 504
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)

    3. NM_001338775.1 → NP_001326836.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DH07, Q9LU89
      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84

    4. NM_001338776.1 → NP_001326837.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84, F4JBC5

    5. NM_001338773.1 → NP_001319644.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84, F4JBC5

    6. NM_001161176.1 → NP_001154648.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154648.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84, F4JBC4
      Conserved Domains (2) summary
      PLN00122
      Location:429 → 528
      PLN00122; serine/threonine protein phosphatase 2A; Provisional
      pfam01603
      Location:101 → 523
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)

    7. NM_001161175.1 → NP_001154647.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154647.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84, F4JBC5
      Conserved Domains (2) summary
      PLN00122
      Location:412 → 511
      PLN00122; serine/threonine protein phosphatase 2A; Provisional
      pfam01603
      Location:101 → 506
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)

    8. NM_001035693.2 → NP_001030770.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030770.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DH07, Q9LU89
      UniProtKB/TrEMBL
      A0A178VLN6, A0A5S9XG84
      Conserved Domains (2) summary
      PLN00122
      Location:410 → 509
      PLN00122; serine/threonine protein phosphatase 2A; Provisional
      pfam01603
      Location:101 → 504
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LU89.1

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