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    CCDC117 coiled-coil domain containing 117 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 748190, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCDC117provided by VGNC
    Official Full Name
    coiled-coil domain containing 117provided by VGNC
    Primary source
    VGNC:VGNC:5241
    Locus tag
    CK820_G0024448
    See related
    Ensembl:ENSPTRG00000014209
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC117 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 23 NC_086016.1 (30927336..31000079)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 22 NC_072420.1 (23959770..24033021)

    Chromosome 23 - NC_086016.1Genomic Context describing neighboring genes Neighboring gene checkpoint kinase 2 Neighboring gene HscB mitochondrial iron-sulfur cluster cochaperone Neighboring gene X-box binding protein 1 Neighboring gene zinc and ring finger 3 Neighboring gene uncharacterized LOC104003733 Neighboring gene chromosome 22 C22orf31 homolog Neighboring gene kringle containing transmembrane protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 117

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_086016.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      30927336..31000079
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001172845.7 → XP_001172845.1  coiled-coil domain-containing protein 117 isoform X1

      See identical proteins and their annotated locations for XP_001172845.1

      UniProtKB/TrEMBL
      A0A2J8QNA2, A0A6D2X8Y7, H2QLF3
      Related
      ENSPTRP00000024462.3
      Conserved Domains (2) summary
      pfam15058
      Location:3 → 61
      Speriolin_N; Speriolin N terminus
      pfam15810
      Location:142 → 279
      CCDC117; Coiled-coil domain-containing protein 117

    2. XM_009438080.4 → XP_009436355.1  coiled-coil domain-containing protein 117 isoform X3

      Conserved Domains (1) summary
      pfam15810
      Location:141 → 204
      CCDC117; Coiled-coil domain-containing protein 117

    3. XM_003317158.6 → XP_003317206.1  coiled-coil domain-containing protein 117 isoform X2

      UniProtKB/TrEMBL
      A0A2I3RJT4, A0A2J8QND6, A0A6D2Y950
      Related
      ENSPTRP00000064949.1
      Conserved Domains (2) summary
      pfam15058
      Location:3 → 61
      Speriolin_N; Speriolin N terminus
      pfam15810
      Location:124 → 261
      CCDC117; Coiled-coil domain-containing protein 117

    4. XM_009438081.5 → XP_009436356.1  coiled-coil domain-containing protein 117 isoform X4

      Conserved Domains (1) summary
      pfam15810
      Location:9 → 138
      CCDC117; Coiled-coil domain-containing protein 117

    5. XM_063807649.1 → XP_063663719.1  coiled-coil domain-containing protein 117 isoform X4

    RNA

    1. XR_001712615.3 RNA Sequence

    2. XR_001712614.4 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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