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    LOC120924197 alpha-crystallin A chain [ Rana temporaria (common frog) ]

    Gene ID: 120924197, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120924197
    Gene description
    alpha-crystallin A chain
    See related
    EnsemblRapid:ENSRTEG00010001414
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rana temporaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
    Also known as
    CRYAA
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    Genomic context

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    See LOC120924197 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current aRanTem1.1 (GCF_905171775.1) Unplaced Scaffold NW_024404839.1 (16136..20566)

    NW_024404839.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024404839 Unplaced Scaffold Reference aRanTem1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The absence of the long 3'-non-translated region in mRNA coding for eye lens alpha A2-crystallin of the frog (Rana temporaria). Tomarev SI, et al. FEBS Lett, 1983 Oct 3. PMID 6604666
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of eye lens IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lens development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-crystallin A chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRanTem1.1

    Genomic

    1. NW_024404839.1 Reference aRanTem1.1

      Range
      16136..20566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040335081.1 → XP_040191015.1  alpha-crystallin A chain

      UniProtKB/Swiss-Prot
      P02508
      Related
      ENSRTEP00010000735.1, ENSRTET00010001797.1
      Conserved Domains (1) summary
      cd06497
      Location:61 → 146
      ACD_alphaA-crystallin_HspB4; Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P02508.1 GenPept UniProtKB/Swiss-Prot:P02508

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