U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    AOB57_RS05960 FmdE family protein [ Methanosarcina flavescens ]

    Gene ID: 53687653, updated on 22-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    AOB57_RS05960
    Gene description
    FmdE family protein
    Locus tag
    AOB57_RS05960
    Gene type
    protein coding
    Organism
    Methanosarcina flavescens (strain: E03.2, culture-collection: DSM:100822, type-material: type strain of Methanosarcina flavescens)
    Lineage
    Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina
    Old locus tag
    AOB57_005980
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_CP032683.1Genomic Context describing neighboring genes Neighboring gene HD domain-containing protein Neighboring gene 2-phospho-L-lactate transferase Neighboring gene hypoxanthine/guanine phosphoribosyltransferase Neighboring gene diphthamide biosynthesis enzyme Dph2 Neighboring gene METTL5 family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_CP032683.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved α+β core domain and an auxiliary C-terminal treble-clef zinc finger. Axelrod HL, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2010 Oct 1. PMID 20944230, Free PMC Article
    2. The molybdenum formylmethanofuran dehydrogenase operon and the tungsten formylmethanofuran dehydrogenase operon from Methanobacterium thermoautotrophicum. Structures and transcriptional regulation. Hochheimer A, et al. Eur J Biochem, 1996 Nov 15. PMID 8954165

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    FmdE family protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP032683.1 Reference assembly

      Range
      1321535..1322641
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_082384163.1 FmdE family protein [Methanosarcina flavescens]

      UniProtKB/TrEMBL
      A0A660HR84
      Conserved Domains (1) summary
      COG5643
      Location:1 → 360
      COG5643; Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases