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    LOC9313228 transmembrane protein 230 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9313228, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9313228
    Gene description
    transmembrane protein 230
    Locus tag
    ARALYDRAFT_905208
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9313228 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302551.1 (5505318..5507181, complement)

    NW_003302551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9313227 Neighboring gene SNF1-related protein kinase catalytic subunit alpha KIN11 Neighboring gene uncharacterized LOC9313229 Neighboring gene uncharacterized LOC110228479

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302551 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 230

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302551.1 Reference v.1.0 Primary Assembly

      Range
      5505318..5507181 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021026747.1 → XP_020882406.1  transmembrane protein 230

      UniProtKB/TrEMBL
      D7LNU5
      Conserved Domains (1) summary
      pfam05915
      Location:9 → 121
      DUF872; Eukaryotic protein of unknown function (DUF872)

    2. XM_002877114.2 → XP_002877160.1  transmembrane protein 230

      See identical proteins and their annotated locations for XP_002877160.1

      UniProtKB/TrEMBL
      D7LNU5
      Conserved Domains (1) summary
      pfam05915
      Location:9 → 121
      DUF872; Eukaryotic protein of unknown function (DUF872)
    Nucleotide Protein
    Heading Accession and Version

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