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    cdc42 cell division cycle 42 [ Acanthochromis polyacanthus (spiny chromis) ]

    Gene ID: 110951271, updated on 12-Sep-2024

    Summary

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    Gene symbol
    cdc42
    Gene description
    cell division cycle 42
    See related
    Ensembl:ENSAPOG00000024073
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthochromis polyacanthus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
    Orthologs
    human zebrafish all
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    Genomic context

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    See cdc42 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 5 NC_067117.1 (27151773..27166706, complement)

    Chromosome 5 - NC_067117.1Genomic Context describing neighboring genes Neighboring gene small vasohibin binding protein Neighboring gene transfer RNA leucine (anticodon CAG) Neighboring gene wingless-type MMTV integration site family, member 4 Neighboring gene cilia- and flagella-associated protein 57-like Neighboring gene small nuclear ribonucleoprotein polypeptide E Neighboring gene UF2 component of NDC80 kinetochore complex

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067117.1 Chromosome 5 Reference KAUST_Apoly_ChrSc

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modification of synaptic structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell division control protein 42 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KAUST_Apoly_ChrSc

    Genomic

    1. NC_067117.1 Reference KAUST_Apoly_ChrSc

      Range
      27151773..27166706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022194242.2 → XP_022049934.1  cell division control protein 42 homolog isoform X1

      UniProtKB/TrEMBL
      A0A3Q1GV38
      Related
      ENSAPOP00000034651.1
      Conserved Domains (1) summary
      cd01874
      Location:3 → 177
      Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

    2. XM_022194243.2 → XP_022049935.1  cell division control protein 42 homolog isoform X1

      UniProtKB/TrEMBL
      A0A3Q1GV38
      Conserved Domains (1) summary
      cd01874
      Location:3 → 177
      Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

    3. XM_022194244.2 → XP_022049936.1  cell division control protein 42 homolog isoform X2

      Conserved Domains (1) summary
      cd01874
      Location:3 → 177
      Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family
    Nucleotide Protein
    Heading Accession and Version

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