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    LOC111138321 dual specificity tyrosine-phosphorylation-regulated kinase 4-like [ Crassostrea virginica (eastern oyster) ]

    Gene ID: 111138321, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111138321
    Gene description
    dual specificity tyrosine-phosphorylation-regulated kinase 4-like
    See related
    EnsemblRapid:LOC111138321
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Crassostrea virginica
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea
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    Genomic context

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    See LOC111138321 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    100 current C_virginica-3.0 (GCF_002022765.2) 1 NC_035780.1 (625970..662443, complement)

    Chromosome 1 - NC_035780.1Genomic Context describing neighboring genes Neighboring gene coatomer subunit alpha-like Neighboring gene R3H domain-containing protein 1-like Neighboring gene uncharacterized LOC111121058 Neighboring gene uncharacterized LOC111138070

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_035780.1 Chromosome 1 Reference C_virginica-3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine/tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-threonine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dual specificity tyrosine-phosphorylation-regulated kinase 4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Crassostrea virginica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C_virginica-3.0 Primary Assembly

    Genomic

    1. NC_035780.1 Reference C_virginica-3.0 Primary Assembly

      Range
      625970..662443 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022490233.1 → XP_022345941.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X1

      UniProtKB/TrEMBL
      A0A8B8F0V7
      Related
      XP_022345941.1, XM_022490233.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor

    2. XM_022490276.1 → XP_022345984.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X4

      UniProtKB/TrEMBL
      A0A8B8F152
      Related
      XP_022345984.1, XM_022490276.1
      Conserved Domains (1) summary
      cd14225
      Location:198 → 538
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    3. XM_022490250.1 → XP_022345958.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X2

      UniProtKB/TrEMBL
      A0A8B8F2B4
      Related
      XP_022345958.1, XM_022490250.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor

    4. XM_022490297.1 → XP_022346005.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X7

      UniProtKB/TrEMBL
      A0A8B8F113
      Related
      XP_022346005.1, XM_022490297.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor

    5. XM_022490289.1 → XP_022345997.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X6

      UniProtKB/TrEMBL
      A0A8B8F1D9
      Related
      XP_022345997.1, XM_022490289.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam16228
      Location:31 → 187
      DUF4887; Domain of unknown function (DUF4887)

    6. XM_022490258.1 → XP_022345966.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X3

      UniProtKB/TrEMBL
      A0A8B8F157
      Related
      XP_022345966.1, XM_022490258.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor

    7. XM_022490224.1 → XP_022345932.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X1

      UniProtKB/TrEMBL
      A0A8B8F0V7
      Related
      XP_022345932.1, XM_022490224.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor

    8. XM_022490269.1 → XP_022345977.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X4

      UniProtKB/TrEMBL
      A0A8B8F152
      Related
      XP_022345977.1, XM_022490269.1
      Conserved Domains (1) summary
      cd14225
      Location:198 → 538
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    9. XM_022490242.1 → XP_022345950.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X1

      UniProtKB/TrEMBL
      A0A8B8F0V7
      Related
      XP_022345950.1, XM_022490242.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor

    10. XM_022490333.1 → XP_022346041.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X11

      UniProtKB/TrEMBL
      A0A8B8F1D2
      Related
      XP_022346041.1, XM_022490333.1
      Conserved Domains (1) summary
      cd14225
      Location:167 → 507
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    11. XM_022490342.1 → XP_022346050.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X12

      UniProtKB/TrEMBL
      A0A8B8F158
      Related
      XP_022346050.1, XM_022490342.1
      Conserved Domains (1) summary
      cd14225
      Location:163 → 503
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    12. XM_022490283.1 → XP_022345991.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X5

      UniProtKB/TrEMBL
      A0A8B8F182
      Related
      XP_022345991.1, XM_022490283.1
      Conserved Domains (1) summary
      cd14225
      Location:191 → 531
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    13. XM_022490316.1 → XP_022346024.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X9

      UniProtKB/TrEMBL
      A0A8B8F198
      Related
      XP_022346024.1, XM_022490316.1
      Conserved Domains (1) summary
      cd14225
      Location:182 → 522
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    14. XM_022490325.1 → XP_022346033.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X10

      UniProtKB/TrEMBL
      A0A8B8F2I1
      Related
      XP_022346033.1, XM_022490325.1
      Conserved Domains (1) summary
      cd14225
      Location:182 → 522
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    15. XM_022490351.1 → XP_022346059.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X13

      UniProtKB/TrEMBL
      A0A8B8F1E5
      Related
      XP_022346059.1, XM_022490351.1
      Conserved Domains (1) summary
      cd14225
      Location:160 → 500
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    16. XM_022490374.1 → XP_022346082.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X15

      UniProtKB/TrEMBL
      A0A8B8F1M6
      Related
      XP_022346082.1, XM_022490374.1
      Conserved Domains (1) summary
      cd14225
      Location:118 → 458
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4

    17. XM_022490368.1 → XP_022346076.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X14

      UniProtKB/TrEMBL
      A0A8B8F2L9
      Related
      XP_022346076.1, XM_022490368.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam16228
      Location:31 → 187
      DUF4887; Domain of unknown function (DUF4887)

    18. XM_022490310.1 → XP_022346018.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X8

      UniProtKB/TrEMBL
      A0A8B8F1A4
      Related
      XP_022346018.1, XM_022490310.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor

    19. XM_022490360.1 → XP_022346068.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X14

      UniProtKB/TrEMBL
      A0A8B8F2L9
      Related
      XP_022346068.1, XM_022490360.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam16228
      Location:31 → 187
      DUF4887; Domain of unknown function (DUF4887)

    20. XM_022490303.1 → XP_022346011.1  dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X8

      UniProtKB/TrEMBL
      A0A8B8F1A4
      Related
      XP_022346011.1, XM_022490303.1
      Conserved Domains (2) summary
      cd14225
      Location:229 → 569
      PKc_DYRK4; Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4
      pfam15991
      Location:26 → 191
      G_path_suppress; G-protein pathway suppressor
    Nucleotide Protein
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