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    rps5 ribosomal protein S5 [ Solea senegalensis (Senegalese sole) ]

    Gene ID: 122786562, updated on 22-Mar-2024

    Summary

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    Gene symbol
    rps5
    Gene description
    ribosomal protein S5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solea senegalensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
    Orthologs
    human zebrafish all
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    Genomic context

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    See rps5 in Genome Data Viewer
    Location:
    chromosome: LG20
    Exon count:
    6
    Annotation release Status Assembly LG Location
    100 current IFAPA_SoseM_1 (GCF_019176455.1) LG20 NC_058039.1 (3190175..3193235)

    Linkage Group LG20 - NC_058039.1Genomic Context describing neighboring genes Neighboring gene carnitine O-acetyltransferase b Neighboring gene palmitoyl-protein thioesterase 2b Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene DDAH family member 2, ADMA-independent Neighboring gene ly6 domain containing, pigment cell

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058039.1 Chromosome LG20 Reference IFAPA_SoseM_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative sequence analysis of the complete set of 40S ribosomal proteins in the Senegalese sole (Solea senegalensis Kaup) and Atlantic halibut (Hippoglossus hippoglossus L.) (Teleostei: Pleuronectiformes): phylogeny and tissue- and development-specific expression. Manchado M, et al. BMC Evol Biol, 2007 Jul 3. PMID 17608926, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal small subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IFAPA_SoseM_1 Primary Assembly

    Genomic

    1. NC_058039.1 Reference IFAPA_SoseM_1 Primary Assembly

      Range
      3190175..3193235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044052946.1 → XP_043908881.1  40S ribosomal protein S5

      UniProtKB/TrEMBL
      A2Q0S0
      Conserved Domains (1) summary
      cd14867
      Location:17 → 203
      uS7_Eukaryote; Eukaryota homolog of Ribosomal Protein S7
    Nucleotide Protein
    Heading Accession and Version

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