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    PF3D7_0502000 vacuolar protein sorting-associated protein 11, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812859, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0502000
    Gene description
    vacuolar protein sorting-associated protein 11, putative
    Locus tag
    PF3D7_0502000
    See related
    PlasmoDB:PF3D7_0502000; VEuPathDB:PF3D7_0502000
    Gene type
    protein coding
    RNA name
    vacuolar protein sorting-associated protein 11, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0502000 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_004326.2 (97657..101895)

    Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene chromatin assembly factor 1 subunit A Neighboring gene conserved protein, unknown function Neighboring gene HCNGP-like protein Neighboring gene protein Mpv17, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004326.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular protein transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 11, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004326.2 Reference assembly

      Range
      97657..101895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351543.1 → XP_001351579.1  vacuolar protein sorting-associated protein 11, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351579.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8I480
      UniProtKB/TrEMBL
      A0A024XBW9, A0A2I0BTZ3
      Conserved Domains (5) summary
      PTZ00121
      Location:374 → 606
      PTZ00121; MAEBL; Provisional
      CHL00117
      Location:3 → 611
      rpoC2; RNA polymerase beta'' subunit; Reviewed
      cd16688
      Location:1188 → 1224
      RING-H2_Vps11; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 11 homolog (Vps11) and similar proteins
      pfam16228
      Location:899 → 978
      DUF4887; Domain of unknown function (DUF4887)
      pfam12451
      Location:1239 → 1269
      VPS11_C; Vacuolar protein sorting protein 11 C terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8I480.1

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