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    ucn3l urocortin 3, like [ Astyanax mexicanus (Mexican tetra) ]

    Gene ID: 103022615, updated on 11-Mar-2024

    Summary

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    Gene symbol
    ucn3l
    Gene description
    urocortin 3, like
    See related
    EnsemblRapid:ENSAMXG00025012879
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astyanax mexicanus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
    Also known as
    ucn3
    Orthologs
    human zebrafish all
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    Genomic context

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    See ucn3l in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current AstMex3_surface (GCF_023375975.1) 2 NC_064409.1 (3444136..3447282, complement)
    102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 7 NC_035903.1 (35598200..35601443, complement)

    Chromosome 2 - NC_064409.1Genomic Context describing neighboring genes Neighboring gene mesoderm specific transcript Neighboring gene COPI coat complex subunit gamma 2 Neighboring gene collagen type VII alpha 1-like Neighboring gene leucine-rich repeats and guanylate kinase domain containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables corticotropin-releasing hormone receptor 2 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to nutrient levels IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in digestion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    urocortin 3, like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AstMex3_surface

    Genomic

    1. NC_064409.1 Reference AstMex3_surface

      Range
      3444136..3447282 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007259008.4 → XP_007259070.2  urocortin 3, like

      UniProtKB/TrEMBL
      A0A8T2MF99
      Related
      ENSAMXP00025016502.1, ENSAMXT00025023714.1
      Conserved Domains (1) summary
      pfam00473
      Location:108 → 145
      CRF; Corticotropin-releasing factor family
    Nucleotide Protein
    Heading Accession and Version

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