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    ATP7A ATPase copper transporting alpha [ Manis pentadactyla (Chinese pangolin) ]

    Gene ID: 118934043, updated on 20-Mar-2024

    Summary

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    Gene symbol
    ATP7A
    Gene description
    ATPase copper transporting alpha
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manis pentadactyla
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
    Orthologs
    human mouse all
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    Genomic context

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    See ATP7A in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2023_06 current mManPen7.hap1 (GCF_030020395.1) X NC_080038.1 (69733929..69928614)
    100 previous assembly YNU_ManPten_2.0 (GCF_014570555.1) Unplaced Scaffold NW_023456817.1 (2282498..2468107, complement)

    Chromosome X - NC_080038.1Genomic Context describing neighboring genes Neighboring gene magnesium transporter 1 Neighboring gene uncharacterized LOC130681733 Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial Neighboring gene 60S ribosomal protein L17-like Neighboring gene acyl-protein thioesterase 1-like Neighboring gene toll-like receptor 13 Neighboring gene phosphoglycerate kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type divalent copper transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in copper ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    copper-transporting ATPase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030020395.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mManPen7.hap1

    Genomic

    1. NC_080038.1 Reference mManPen7.hap1

      Range
      69733929..69928614
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_057495796.1 → XP_057351779.1  copper-transporting ATPase 1 isoform X1

    2. XM_036929137.2 → XP_036785032.2  copper-transporting ATPase 1 isoform X1

    3. XM_036929136.2 → XP_036785031.2  copper-transporting ATPase 1 isoform X1

    4. XM_036929140.2 → XP_036785035.2  copper-transporting ATPase 1 isoform X3

    5. XM_036929138.2 → XP_036785033.2  copper-transporting ATPase 1 isoform X1

    6. XM_057495795.1 → XP_057351778.1  copper-transporting ATPase 1 isoform X1

    7. XM_057495797.1 → XP_057351780.1  copper-transporting ATPase 1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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