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    LOC123057696 probable receptor-like protein kinase At5g39020 [ Triticum aestivum (bread wheat) ]

    Gene ID: 123057696, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC123057696
    Gene description
    probable receptor-like protein kinase At5g39020
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triticum aestivum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
    Also known as
    Stb6; WAKL4/Stb6
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    Genomic context

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    See LOC123057696 in Genome Data Viewer
    Location:
    chromosome: 3A
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 3A NC_057800.1 (26822659..26828250)

    Chromosome 3A - NC_057800.1Genomic Context describing neighboring genes Neighboring gene wall-associated receptor kinase 3-like Neighboring gene LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 Neighboring gene LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5 Neighboring gene uncharacterized LOC123059989 Neighboring gene uncharacterized LOC123059990

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057800.1 Chromosome 3A Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence. Cantu D, et al. BMC Genomics, 2011 Oct 7. PMID 21981858, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables polysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable receptor-like protein kinase At5g39020

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Genomic

    1. NC_057800.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

      Range
      26822659..26828250
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044480615.1 → XP_044336550.1  probable receptor-like protein kinase At5g39020

      UniProtKB/TrEMBL
      A0A1D5VHV3, A0A2H4ZAY8, A0A2H4ZB31
      Conserved Domains (2) summary
      pfam13947
      Location:33 → 103
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
      cl21453
      Location:333 → 599
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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