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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001418820.1 → NP_001405749.1 chromodomain-helicase-DNA-binding protein 1-like isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC140839
-
NM_026539.3 → NP_080815.1 chromodomain-helicase-DNA-binding protein 1-like isoform 1
See identical proteins and their annotated locations for NP_080815.1
Status: VALIDATED
- Source sequence(s)
-
AC140839
- Consensus CDS
-
CCDS38561.1
- UniProtKB/Swiss-Prot
- Q3TMX1, Q6P5C0, Q9CXF7
- Related
- ENSMUSP00000029730.5, ENSMUST00000029730.5
- Conserved Domains (4) summary
-
- cd00046
Location:59 → 199
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd03331
Location:721 → 871
- Macro_Poa1p_like_SNF2; Macro domain, Poa1p_like family, SNF2 subfamily. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ...
- pfam00176
Location:43 → 322
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:340 → 453
- Helicase_C; Helicase conserved C-terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
97468056..97517538 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036163259.1 → XP_036019152.1 chromodomain-helicase-DNA-binding protein 1-like isoform X3
- Conserved Domains (1) summary
-
- PLN03142
Location:39 → 549
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
-
XM_017319701.3 → XP_017175190.1 chromodomain-helicase-DNA-binding protein 1-like isoform X2
- Conserved Domains (1) summary
-
- PLN03142
Location:39 → 549
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional