U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC111834512 plakophilin-3-like [ Paramormyrops kingsleyae ]

    Gene ID: 111834512, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111834512
    Gene description
    plakophilin-3-like
    See related
    Ensembl:ENSPKIG00000020239
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Paramormyrops kingsleyae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111834512 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019715663.1 (69133..96216, complement)

    NW_019715663.1Genomic Context describing neighboring genes Neighboring gene anoctamin-9-like Neighboring gene tumor suppressing subtransferable candidate 4 Neighboring gene CD81 molecule a Neighboring gene potassium voltage-gated channel, Shaw-related subfamily, member 1a

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019715663 Unplaced Scaffold Reference PKINGS_0.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    plakophilin-3-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PKINGS_0.1

    Genomic

    1. NW_019715663.1 Reference PKINGS_0.1

      Range
      69133..96216 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023793878.1 → XP_023649646.1  plakophilin-3-like isoform X3

      UniProtKB/TrEMBL
      A0A3B3Q6R8

    2. XM_023793877.1 → XP_023649645.1  plakophilin-3-like isoform X2

      UniProtKB/TrEMBL
      A0A3B3Q6R8, A0A3B3Q912
      Related
      ENSPKIP00000002304.1, ENSPKIT00000026247.1

    3. XM_023793876.1 → XP_023649644.1  plakophilin-3-like isoform X1

      UniProtKB/TrEMBL
      A0A3B3Q6R8
      Related
      ENSPKIP00000002327.1, ENSPKIT00000026271.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases