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    SNRPE small nuclear ribonucleoprotein polypeptide E [ Bos taurus (domestic cattle) ]

    Gene ID: 531493, updated on 4-Oct-2024

    Summary

    Gene symbol
    SNRPE
    Gene description
    small nuclear ribonucleoprotein polypeptide E
    See related
    BGD:BT26953; Ensembl:ENSBTAG00000050130
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See SNRPE in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (1636025..1641981)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene lymphocyte transmembrane adaptor 1 Neighboring gene uncharacterized LOC132342431 Neighboring gene zinc finger CCCH-type containing 11A Neighboring gene uncharacterized LOC104974354 Neighboring gene small ribosomal subunit protein bS21m-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Clone Names

    • MGC140763

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U4 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U5 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    small nuclear ribonucleoprotein E
    Names
    sm protein E
    sm-E
    smE
    snRNP-E

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083459.2NP_001076928.1  small nuclear ribonucleoprotein E

      See identical proteins and their annotated locations for NP_001076928.1

      Status: PROVISIONAL

      Source sequence(s)
      BC114915
      UniProtKB/Swiss-Prot
      A4FUI2
      UniProtKB/TrEMBL
      F1ME11
      Related
      ENSBTAP00000059185.2, ENSBTAT00000072928.2
      Conserved Domains (1) summary
      cd01718
      Location:1189
      Sm_E; Sm protein E

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      1636025..1641981
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)