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    SpAN protein SpAN [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 593517, updated on 14-Dec-2023

    Summary

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    Gene symbol
    SpAN
    Gene description
    protein SpAN
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    See SpAN in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145615.1 (1370304..1376990, complement)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003576967.1 (501294..506215, complement)

    NW_022145615.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115920704 Neighboring gene blastula protease 10 Neighboring gene protein SpAN Neighboring gene protein SpAN Neighboring gene protein SpAN Neighboring gene cytochrome P450 2J6 Neighboring gene uncharacterized LOC115920721

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a SpAN promoter sufficient to mediate correct spatial regulation along the animal-vegetal axis of the sea urchin embryo. Kozlowski DJ, et al. Dev Biol, 1996 May 25. PMID 8654898
    2. Early mRNAs, spatially restricted along the animal-vegetal axis of sea urchin embryos, include one encoding a protein related to tolloid and BMP-1. Reynolds SD, et al. Development, 1992 Mar. PMID 1618141
    3. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SpAN
    Names
    metalloproteinase SpAN
    NP_999767.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_214602.3 → NP_999767.2  protein SpAN precursor

      Status: VALIDATED

      Source sequence(s)
      JT102640
      UniProtKB/Swiss-Prot
      P98068
      UniProtKB/TrEMBL
      A0A7M6UX59

    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145615.1 Reference Spur_5.0 Primary Assembly

      Range
      1370304..1376990 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P98068.1 GenPept UniProtKB/Swiss-Prot:P98068

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