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    SLA Src like adaptor [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100435778, updated on 26-Mar-2024

    Summary

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    Gene symbol
    SLA
    Gene description
    Src like adaptor
    Locus tag
    CR201_G0050200
    See related
    Ensembl:ENSPPYG00000018893
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See SLA in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 7 NC_071992.2 (149445471..149537518, complement)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 8 NC_071993.1 (153076857..153115072, complement)

    Chromosome 7 - NC_071992.2Genomic Context describing neighboring genes Neighboring gene PHD finger protein 20 like 1 Neighboring gene uncharacterized LOC134761970 Neighboring gene thyroglobulin Neighboring gene uncharacterized LOC129047553 Neighboring gene uncharacterized LOC129047554 Neighboring gene cellular communication network factor 4 Neighboring gene N-myc downstream regulated 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables epidermal growth factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphotyrosine residue binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of MAPK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COP9 signalosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    src-like-adapter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071992.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      149445471..149537518 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024251257.3 → XP_024107025.1  src-like-adapter isoform X2

      UniProtKB/TrEMBL
      A0A2J8RKU5, A0A2J8RKU9, A0A6D2WQN6, H2PR88
      Conserved Domains (2) summary
      cd10344
      Location:73 → 170
      SH2_SLAP; Src homology 2 domain found in Src-like adaptor proteins
      cd12010
      Location:26 → 80
      SH3_SLAP; Src homology 3 domain of Src-Like Adaptor Protein

    2. XM_009244112.3 → XP_009242387.1  src-like-adapter isoform X1

      UniProtKB/TrEMBL
      A0A2J8RKU0, A0A8I5TYX3
      Related
      ENSPPYP00000044269.1
      Conserved Domains (2) summary
      cd10344
      Location:114 → 211
      SH2_SLAP; Src homology 2 domain found in Src-like adaptor proteins
      cd12010
      Location:67 → 121
      SH3_SLAP; Src homology 3 domain of Src-Like Adaptor Protein
    Nucleotide Protein
    Heading Accession and Version

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