U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100829680 uncharacterized LOC100829680 [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100829680, updated on 6-Apr-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100829680
    Gene description
    uncharacterized LOC100829680
    Locus tag
    BRADI_1g37311v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100829680 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (33277956..33288391, complement)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (33279200..33289064, complement)

    Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112269780 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570 Neighboring gene uncharacterized LOC112270070 Neighboring gene protein NRT1/ PTR FAMILY 4.6

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC100829680

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      33277956..33288391 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024456496.1 → XP_024312264.1  uncharacterized protein LOC100829680 isoform X1

      UniProtKB/TrEMBL
      I1GXS2
      Conserved Domains (1) summary
      pfam07343
      Location:2 → 236
      DUF1475; Protein of unknown function (DUF1475)

    2. XM_024456497.1 → XP_024312265.1  uncharacterized protein LOC100829680 isoform X1

      UniProtKB/TrEMBL
      I1GXS2
      Conserved Domains (1) summary
      pfam07343
      Location:2 → 236
      DUF1475; Protein of unknown function (DUF1475)

    3. XM_024456498.1 → XP_024312266.1  uncharacterized protein LOC100829680 isoform X2

      Conserved Domains (1) summary
      pfam07343
      Location:2 → 237
      DUF1475; Protein of unknown function (DUF1475)

    4. XM_010229271.3 → XP_010227573.1  uncharacterized protein LOC100829680 isoform X1

      UniProtKB/TrEMBL
      I1GXS2
      Conserved Domains (1) summary
      pfam07343
      Location:2 → 236
      DUF1475; Protein of unknown function (DUF1475)

    5. XM_014897563.2 → XP_014753049.1  uncharacterized protein LOC100829680 isoform X4

      UniProtKB/TrEMBL
      I1GXS3
      Conserved Domains (1) summary
      pfam07343
      Location:2 → 236
      DUF1475; Protein of unknown function (DUF1475)

    6. XM_024456495.1 → XP_024312263.1  uncharacterized protein LOC100829680 isoform X1

      UniProtKB/TrEMBL
      I1GXS2
      Conserved Domains (1) summary
      pfam07343
      Location:2 → 236
      DUF1475; Protein of unknown function (DUF1475)

    7. XM_003563661.4 → XP_003563709.1  uncharacterized protein LOC100829680 isoform X5

      UniProtKB/TrEMBL
      I1GXS0
      Conserved Domains (1) summary
      pfam07343
      Location:2 → 237
      DUF1475; Protein of unknown function (DUF1475)

    8. XM_010229272.3 → XP_010227574.1  uncharacterized protein LOC100829680 isoform X3

      UniProtKB/TrEMBL
      I1GXS1
      Conserved Domains (1) summary
      pfam07343
      Location:2 → 236
      DUF1475; Protein of unknown function (DUF1475)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases