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    rag2 recombination activating gene 2 [ Clupea harengus (Atlantic herring) ]

    Gene ID: 105900788, updated on 18-Jun-2024

    Summary

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    Gene symbol
    rag2
    Gene description
    recombination activating gene 2
    See related
    Ensembl:ENSCHAG00020008327
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Clupea harengus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
    Orthologs
    human zebrafish all
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    Genomic context

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    See rag2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Ch_v2.0.2 (GCF_900700415.2) 3 NC_045154.1 (24591840..24594745, complement)

    Chromosome 3 - NC_045154.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:ch211-256a21.4 Neighboring gene intraflagellar transport associated protein Neighboring gene recombination activating 1 Neighboring gene leucine rich repeat containing 4C, genome duplicate a Neighboring gene ets homologous factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045154.1 Chromosome 3 Reference Ch_v2.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in V(D)J recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DNA recombinase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V(D)J recombination-activating protein 2
    Names
    recombination activating 2
    recombination activating protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ch_v2.0.2 Primary Assembly

    Genomic

    1. NC_045154.1 Reference Ch_v2.0.2 Primary Assembly

      Range
      24591840..24594745 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031565155.1 → XP_031421015.1  V(D)J recombination-activating protein 2

      UniProtKB/TrEMBL
      A0A6P8FB81
      Related
      ENSCHAP00020017947.1, ENSCHAT00020019167.1
      Conserved Domains (2) summary
      pfam03089
      Location:51 → 388
      RAG2; Recombination activating protein 2
      pfam13341
      Location:415 → 493
      RAG2_PHD; RAG2 PHD domain
    Nucleotide Protein
    Heading Accession and Version

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