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    SRAE_1000356400 Cyclin-K [ Strongyloides ratti ]

    Gene ID: 36377676, updated on 21-Dec-2023

    Summary

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    Gene symbol
    SRAE_1000356400
    Gene description
    Cyclin-K
    Locus tag
    SRAE_1000356400
    Gene type
    protein coding
    RNA name
    Cyclin-K
    RefSeq status
    PROVISIONAL
    Organism
    Strongyloides ratti (strain: ED321 Heterogonic)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides
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    Genomic context

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    See SRAE_1000356400 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_037307.1 (11656385..11657177)

    Chromosome 1 - NC_037307.1Genomic Context describing neighboring genes Neighboring gene Angiopoietin-related protein 5 Neighboring gene MFS-type transporter SLC18B1 Neighboring gene Structural maintenance of chromosomes protein Neighboring gene Hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037307.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription, elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cyclin/CDK positive transcription elongation factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Cyclin-K

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037307.1 Reference assembly

      Range
      11656385..11657177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024650768.1 → XP_024504512.1  Cyclin-K [Strongyloides ratti]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A090L684
      Conserved Domains (1) summary
      cl28538
      Location:28 → 213
      CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
    Nucleotide Protein
    Heading Accession and Version

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