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    LOC102368098 myosin-7B [ Alligator sinensis (Chinese alligator) ]

    Gene ID: 102368098, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC102368098
    Gene description
    myosin-7B
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator sinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
    Also known as
    MYH7B
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    Genomic context

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    See LOC102368098 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    46
    Annotation release Status Assembly Chr Location
    102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005843415.1 (24837..86640, complement)

    NW_005843415.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily C member 4 associated protein Neighboring gene uncharacterized LOC112548695

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005843415 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin heavy chain, cardiac muscle isoform; myosin-7B
    Names
    myosin, heavy chain 7B, cardiac muscle, beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM45574v1 Primary Assembly

    Genomic

    1. NW_005843415.1 Reference ASM45574v1 Primary Assembly

      Range
      24837..86640 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025195157.1 → XP_025050942.1  myosin-7B isoform X2

      UniProtKB/TrEMBL
      A0A3Q0FUL3
      Conserved Domains (3) summary
      cd14927
      Location:99 → 774
      MYSc_Myh7b; class II myosin heavy chain 7b, motor domain
      pfam02736
      Location:34 → 72
      Myosin_N; Myosin N-terminal SH3-like domain
      cl25732
      Location:854 → 1931
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_025195156.1 → XP_025050941.1  myosin-7B isoform X2

      UniProtKB/TrEMBL
      A0A3Q0FUL3
      Conserved Domains (3) summary
      cd14927
      Location:99 → 774
      MYSc_Myh7b; class II myosin heavy chain 7b, motor domain
      pfam02736
      Location:34 → 72
      Myosin_N; Myosin N-terminal SH3-like domain
      cl25732
      Location:854 → 1931
      SMC_N; RecF/RecN/SMC N terminal domain

    3. XM_025195158.1 → XP_025050943.1  myosin-7B isoform X3

      UniProtKB/TrEMBL
      A0A3Q0FYU4
      Conserved Domains (3) summary
      cd14927
      Location:99 → 774
      MYSc_Myh7b; class II myosin heavy chain 7b, motor domain
      pfam02736
      Location:34 → 72
      Myosin_N; Myosin N-terminal SH3-like domain
      cl25732
      Location:854 → 1899
      SMC_N; RecF/RecN/SMC N terminal domain

    4. XM_025195155.1 → XP_025050940.1  myosin-7B isoform X1

      UniProtKB/TrEMBL
      A0A3Q0FXV7
      Conserved Domains (3) summary
      cd14927
      Location:99 → 774
      MYSc_Myh7b; class II myosin heavy chain 7b, motor domain
      pfam02736
      Location:34 → 72
      Myosin_N; Myosin N-terminal SH3-like domain
      cl25732
      Location:854 → 1931
      SMC_N; RecF/RecN/SMC N terminal domain

    5. XM_025195159.1 → XP_025050944.1  myosin heavy chain, cardiac muscle isoform isoform X5

      UniProtKB/TrEMBL
      A0A3Q0FUC5
      Conserved Domains (2) summary
      cl22853
      Location:1 → 544
      Motor_domain; Myosin and Kinesin motor domain
      cl25732
      Location:624 → 1701
      SMC_N; RecF/RecN/SMC N terminal domain

    6. XM_006038625.2 → XP_006038687.1  myosin-7B isoform X4

      UniProtKB/TrEMBL
      A0A1U7SVB3
      Conserved Domains (9) summary
      cd14927
      Location:99 → 774
      MYSc_Myh7b; class II myosin heavy chain 7b, motor domain
      pfam00063
      Location:87 → 774
      Myosin_head; Myosin head (motor domain)
      pfam01576
      Location:854 → 1931
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:35 → 72
      Myosin_N; Myosin N-terminal SH3-like domain
      pfam05837
      Location:1819 → 1891
      CENP-H; Centromere protein H (CENP-H)
      pfam07851
      Location:1748 → 1834
      TMPIT; TMPIT-like protein
      pfam15272
      Location:1450 → 1553
      BBP1_C; Spindle pole body component BBP1, C-terminal
      cl19219
      Location:1161 → 1249
      DUF342; Protein of unknown function (DUF342)
      cl23720
      Location:969 → 1102
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
    Nucleotide Protein
    Heading Accession and Version

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