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    LOC101496705 ADP-ribosylation factor [ Cicer arietinum (chickpea) ]

    Gene ID: 101496705, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101496705
    Gene description
    ADP-ribosylation factor
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Cicer arietinum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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    Genomic context

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    See LOC101496705 in Genome Data Viewer
    Location:
    chromosome: Ca2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current ASM33114v1 (GCF_000331145.1) Ca2 NC_021161.1 (8343675..8346894)

    Chromosome Ca2 - NC_021161.1Genomic Context describing neighboring genes Neighboring gene polygalacturonase At1g48100-like Neighboring gene phosphatidylinositol 3-kinase, root isoform Neighboring gene ADP-ribosylation factor 2 Neighboring gene type 2 DNA topoisomerase 6 subunit B-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_021161.1 Chromosome Ca2 Reference ASM33114v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001364907.1 → NP_001351836.1  ADP-ribosylation factor

      Status: VALIDATED

      Source sequence(s)
      ANPC01002575
      UniProtKB/TrEMBL
      A0A1S3DYE1
      Conserved Domains (1) summary
      PLN00223
      Location:1 → 181
      PLN00223; ADP-ribosylation factor; Provisional

    RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM33114v1 Primary Assembly

    Genomic

    1. NC_021161.1 Reference ASM33114v1 Primary Assembly

      Range
      8343675..8346894
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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