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    LOC112914229 beta-defensin 110-like [ Vulpes vulpes (red fox) ]

    Gene ID: 112914229, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC112914229
    Gene description
    beta-defensin 110-like
    See related
    Ensembl:ENSVVUG00000029342
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vulpes vulpes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
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    Genomic context

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    See LOC112914229 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356442.1 (15536790..15541639, complement)

    NW_020356442.1Genomic Context describing neighboring genes Neighboring gene defensin beta 114 Neighboring gene defensin beta 113 Neighboring gene defensin beta 112 Neighboring gene small nuclear ribonucleoprotein Sm D2 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020356442 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CCR6 chemokine receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chemoattractant activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-defensin 110-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VulVul2.2 Primary Assembly

    Genomic

    1. NW_020356442.1 Reference VulVul2.2 Primary Assembly

      Range
      15536790..15541639 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025991223.1 → XP_025847008.1  beta-defensin 110-like

      UniProtKB/TrEMBL
      A0A3Q7RP46
      Related
      ENSVVUP00000041230.1, ENSVVUT00000053907.1
      Conserved Domains (1) summary
      pfam13841
      Location:35 → 64
      Defensin_beta_2; Beta defensin
    Nucleotide Protein Strain
    Heading Accession and Version

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