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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001083927.1 → NP_001077396.1 transducin-like enhancer protein 3 isoform 1
See identical proteins and their annotated locations for NP_001077396.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest protein (isoform 1).
- Source sequence(s)
-
AC126672, BB611599, BC056465, BX630781
- Consensus CDS
-
CCDS52826.1
- UniProtKB/TrEMBL
-
E0CXS2
- Related
- ENSMUSP00000124131.2, ENSMUST00000160882.8
- Conserved Domains (4) summary
-
- cd00200
Location:494 → 779
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:261 → 482
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:499 → 538
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_001083928.1 → NP_001077397.1 transducin-like enhancer protein 3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has multiple differences in the coding region compared to variant 1. The resulting protein (isoform 3) is shorter but has the same N- and C-termini compared to isoform 1.
- Source sequence(s)
-
AC126672, AK122524, BB611599, BQ770333, BX630781
- Consensus CDS
-
CCDS52824.1
- UniProtKB/TrEMBL
- E0CXS2, F8WIE2
- Related
- ENSMUSP00000034820.10, ENSMUST00000034820.16
- Conserved Domains (4) summary
-
- cd00200
Location:476 → 761
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:251 → 464
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:481 → 520
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_009389.2 → NP_033415.2 transducin-like enhancer protein 3 isoform 2
See identical proteins and their annotated locations for NP_033415.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' coding region compared to variant 1. The resulting protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1.
- Source sequence(s)
-
AC126672, AK031322, AK122524, BB611599, BQ770333, BX630781
- Consensus CDS
-
CCDS52825.1
- UniProtKB/Swiss-Prot
- Q08122, Q6PHP0, Q923A4
- UniProtKB/TrEMBL
-
E0CXS2
- Related
- ENSMUSP00000124173.2, ENSMUST00000162973.8
- Conserved Domains (4) summary
-
- cd00200
Location:484 → 769
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:251 → 472
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:489 → 528
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000075.7 Reference GRCm39 C57BL/6J
- Range
-
61279608..61325779
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006511026.4 → XP_006511089.1 transducin-like enhancer protein 3 isoform X4
- UniProtKB/TrEMBL
-
E0CXS2
- Conserved Domains (4) summary
-
- cd00200
Location:489 → 774
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:261 → 477
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:494 → 533
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_006511025.4 → XP_006511088.1 transducin-like enhancer protein 3 isoform X2
- UniProtKB/TrEMBL
-
E0CXS2
- Conserved Domains (4) summary
-
- cd00200
Location:491 → 776
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:261 → 479
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:496 → 535
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_006511027.4 → XP_006511090.1 transducin-like enhancer protein 3 isoform X5
- UniProtKB/TrEMBL
-
E0CXS2
- Related
- ENSMUSP00000124150.2, ENSMUST00000162127.2
- Conserved Domains (4) summary
-
- cd00200
Location:486 → 771
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:261 → 474
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:491 → 530
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_017313277.2 → XP_017168766.1 transducin-like enhancer protein 3 isoform X1
- UniProtKB/TrEMBL
-
E0CXS2
- Conserved Domains (4) summary
-
- cd00200
Location:493 → 778
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:260 → 481
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:498 → 537
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 142
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_036154839.1 → XP_036010732.1 transducin-like enhancer protein 3 isoform X3
- UniProtKB/TrEMBL
-
E0CXS2
- Conserved Domains (4) summary
-
- cd00200
Location:490 → 775
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:260 → 478
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:495 → 534
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 142
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_006511029.4 → XP_006511092.1 transducin-like enhancer protein 3 isoform X9
- UniProtKB/TrEMBL
- E0CXS2, E0CXS9
- Related
- ENSMUSP00000125032.2, ENSMUST00000159050.8
- Conserved Domains (4) summary
-
- cd00200
Location:479 → 764
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:251 → 467
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:484 → 523
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_006511028.4 → XP_006511091.1 transducin-like enhancer protein 3 isoform X7
- UniProtKB/TrEMBL
-
E0CXS2
- Related
- ENSMUSP00000124977.2, ENSMUST00000162583.8
- Conserved Domains (4) summary
-
- cd00200
Location:481 → 766
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:251 → 469
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:486 → 525
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_017313278.2 → XP_017168767.1 transducin-like enhancer protein 3 isoform X6
- UniProtKB/TrEMBL
-
E0CXS2
- Conserved Domains (4) summary
-
- cd00200
Location:483 → 768
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:250 → 471
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:488 → 527
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 132
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_006511030.4 → XP_006511093.1 transducin-like enhancer protein 3 isoform X10
- UniProtKB/TrEMBL
-
E0CXS2
- Conserved Domains (4) summary
-
- cd00200
Location:478 → 763
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:250 → 466
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:483 → 522
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 132
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_017313279.2 → XP_017168768.1 transducin-like enhancer protein 3 isoform X8
- UniProtKB/TrEMBL
-
E0CXS2
- Related
- ENSMUSP00000123723.2, ENSMUST00000159630.8
- Conserved Domains (4) summary
-
- cd00200
Location:480 → 765
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:250 → 468
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:485 → 524
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 132
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_006511031.4 → XP_006511094.1 transducin-like enhancer protein 3 isoform X11
- UniProtKB/TrEMBL
-
E0CXS2
- Conserved Domains (4) summary
-
- cd00200
Location:475 → 760
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:250 → 463
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:480 → 519
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 132
- TLE_N; Groucho/TLE N-terminal Q-rich domain
RNA
-
XR_003947845.1 RNA Sequence