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    LOC100267380 umecyanin-like [ Vitis vinifera (wine grape) ]

    Gene ID: 100267380, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100267380
    Gene description
    umecyanin-like
    Locus tag
    VIT_00019486001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100267380 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 2 NC_081806.1 (868182..869240, complement)
    102 previous assembly 12X (GCF_000003745.3) 2 NC_012008.3 (1047892..1048904, complement)

    Chromosome 2 - NC_081806.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2-17 kDa Neighboring gene ethylene-responsive transcription factor CRF2 Neighboring gene uncharacterized LOC100251959 Neighboring gene protein SPA1-RELATED 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. Velasco R, et al. PLoS One, 2007 Dec 19. PMID 18094749, Free PMC Article
    2. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
    3. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    umecyanin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081806.1 Reference ASM3070453v1 Primary Assembly

      Range
      868182..869240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002274068.4 → XP_002274104.1  umecyanin

      See identical proteins and their annotated locations for XP_002274104.1

      UniProtKB/TrEMBL
      A0A438E5Z8, A0A438J5F3, A5BPK6
      Conserved Domains (1) summary
      cd13920
      Location:23 → 123
      Stellacyanin; Stellacyanin is a subclass of phytocyanins, a plant type I copper protein
    Nucleotide Protein
    Heading Accession and Version

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